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1.
Expert Syst Appl ; 206: 117812, 2022 Nov 15.
Article in English | MEDLINE | ID: covidwho-1895038

ABSTRACT

The rapid outbreak of COVID-19 has affected the lives and livelihoods of a large part of the society. Hence, to confine the rapid spread of this virus, early detection of COVID-19 is extremely important. One of the most common ways of detecting COVID-19 is by using chest X-ray images. In the literature, it is found that most of the research activities applied convolutional neural network (CNN) models where the features generated by the last convolutional layer were directly passed to the classification models. In this paper, convolutional long short-term memory (ConvLSTM) layer is used in order to encode the spatial dependency among the feature maps obtained from the last convolutional layer of the CNN and to improve the image representational capability of the model. Additionally, the squeeze-and-excitation (SE) block, a spatial attention mechanism, is used to allocate weights to important local features. These two mechanisms are employed on three popular CNN models - VGG19, InceptionV3, and MobileNet to improve their classification strength. Finally, the Sugeno fuzzy integral based ensemble method is used on these classifiers' outputs to enhance the detection accuracy further. For experiments, three chest X-ray datasets, which are very prevalent for COVID-19 detection, are considered. For all the three datasets, it is found that the results obtained by the proposed method are comparable to state-of-the-art methods. The code, along with the pre-trained models, can be found at https://github.com/colabpro123/CovidConvLSTM.

2.
Measurement (Lond) ; 187: 110289, 2022 Jan.
Article in English | MEDLINE | ID: covidwho-1466782

ABSTRACT

Biomedical images contain a large volume of sensor measurements, which can reveal the descriptors of the disease under investigation. Computer-based analysis of such measurements helps detect the disease, and thereby swiftly aid medical professionals to choose adequate therapy. In this paper, we propose a robust deep learning ensemble framework known as COVID Fuzzy Ensemble Network, or COFE-Net. This strategy is proposed for the task of COVID-19 screening from chest X-rays (CXR) and CT Scans, as a part of Computer-Aided Detection (CADe) for medical practitioners. We leverage the strategy of Transfer Learning for Convolutional Neural Networks (CNNs) widely adopted in recent literature, and further propose an efficient ensemble network for their combination. The principles of fuzzy logic have been leveraged to combine the measured decision scores generated by three state-of-the-art CNNs - Inception V3, Inception ResNet V2 and DenseNet 201 - through the Choquet fuzzy integral. Experimental results support the efficacy of our approach over empirical ensembling, as the fuzzy ensembling strategy for biomedical measurement consists of dynamic refactoring of the classifier ensemble weights on the fly, based upon the confidence scores for coalitions of inputs. This is the chief advantage of our biomedical measurement strategy over others as other methods do not adjust to the multiple generated measurements dynamically unlike ours.Impressive results on multiple datasets demonstrate the effectiveness of the proposed method. The source code of our proposed method is made available at: https://github.com/theavicaster/covid-cade-ensemble.

3.
Comput Biol Med ; 135: 104585, 2021 08.
Article in English | MEDLINE | ID: covidwho-1297045

ABSTRACT

The COVID-19 outbreak has resulted in a global pandemic and led to more than a million deaths to date. COVID-19 early detection is essential for its mitigation by controlling its spread from infected patients in communities through quarantine. Although vaccination has started, it will take time to reach everyone, especially in developing nations, and computer scientists are striving to come up with competent methods using image analysis. In this work, a classifier ensemble technique is proposed, utilizing Choquet fuzzy integral, wherein convolutional neural network (CNN) based models are used as base classifiers. It classifies chest X-ray images from patients with common Pneumonia, confirmed COVID-19, and healthy lungs. Since there are few samples of COVID-19 cases for training on a standard CNN model from scratch, we use the transfer learning scheme to train the base classifiers, which are InceptionV3, DenseNet121, and VGG19. We utilize the pre-trained CNN models to extract features and classify the chest X-ray images using two dense layers and one softmax layer. After that, we combine the prediction scores of the data from individual models using Choquet fuzzy integral to get the final predicted labels, which is more accurate than the prediction by the individual models. To determine the fuzzy-membership values of each classifier for the application of Choquet fuzzy integral, we use the validation accuracy of each classifier. The proposed method is evaluated on chest X-ray images in publicly available repositories (IEEE and Kaggle datasets). It provides 99.00%, 99.00%, 99.00%, and 99.02% average recall, precision, F-score, and accuracy, respectively. We have also evaluated the performance of the proposed model on an inter-dataset experimental setup, where chest X-ray images from another dataset (CMSC-678-ML-Project GitHub dataset) are fed to our trained model and we have achieved 99.05% test accuracy on this dataset. The results are better than commonly used classifier ensemble methods as well as many state-of-the-art methods.


Subject(s)
COVID-19 , Deep Learning , Neural Networks, Computer , COVID-19/diagnosis , Humans , Pandemics
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